loadMIontology.Rddownload and read Molecular Interaction ontology into R using ontologyIndex package
loadMIontology(directory = "./", date = NULL, propagate_relationships = "is_a", extract_tags = "minimal")
| directory | where to keep local copy of the MI ontology |
|---|---|
| date | character, such as "2017_08_25", use specific version of ontology (local copy must be present), by default (NULL) download the latest version |
| propagate_relationships | parameter for reading ontology into R, details: |
| extract_tags | parameter for reading ontology into R, details: |
MITABdata